Monthly Archives: April 2011

Announcing OBF Google Summer of Code Accepted Students

Posted on April 26, 2011 by Robert Buels

I’m very pleased and excited to announce that the Open Bioinformatics Foundation has selected 6 very capable students to work on OBF projects this summer as part of the Google Summer of Code program. The accepted students, their projects, and … Continue reading →

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BioPerl-DB, BioPerl-Run, BioPerl-Network 1.6.9 released

Posted on April 21, 2011 by Chris Fields

The latest BioPerl-DB, BioPerl-Run, and BioPerl-Network code has been released to CPAN: BioPerl-Run BioPerl-DB BioPerl-Network Please report any bugs to our Redmine server. Enjoy! chris

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BioPerl 1.6.9 released

Posted on April 14, 2011 by Chris Fields

BioPerl 1.6.9 is now available in CPAN.  In this release: Refactored Bio::Species/Bio::Tree New SeqIO modules (gbxml, msout, mbsout) Updates for perl 5.12 Bio::Assembly support for SAM/BAM, Newbler, ace output Bio::DB::SeqFeature updates PAML updated to work with v. 4.4d lots of … Continue reading →

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Biopython 1.57 released

Posted on April 2, 2011 by Brad Chapman

The Biopython community is pleased to announce the release of Biopython 1.57. Source distributions and Windows installers are available from the downloads page on the Biopython website and from the Python Package Index. Bio.SeqIO now includes an index_db() function which … Continue reading →

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