Archive for the ‘Community’ Category
Monday, August 17th, 2009
We are pleased to announce the release of Biopython 1.51.This new stable release enhances version 1.50 (released in April) by extending the functionality of existing modules, adding a set of application wrappers for popular alignment programs and fixing a number of minor bugs.
In particular, the SeqIO module ...
Posted in Biopython, Code, Community, Development, OBF, OBF Projects | 1 Comment »
Tuesday, June 23rd, 2009
A beta release for Biopython 1.51 is now available for download and testing.
In the two months since Biopython 1.50 was released, we have introduced support for writing features in GenBank files using Bio.SeqIO, extended SeqIO's support for the FASTQ format to include files created by Illumina 1.3+, and added a ...
Posted in Biopython, Code, Community, Development, OBF Projects | No Comments »
Monday, June 1st, 2009
The BOSC 2009 schedule of speakers with links to abstracts has been posted at http://www.open-bio.org/wiki/BOSC_2009_Schedule.
Posted in BOSC/ISMB, Community, OBF | No Comments »
Wednesday, May 13th, 2009
Alan Ruttenberg of Science Commons and Robert Hanmer of the Hillside Group have been confirmed as Keynote Speakers for BOSC 2009. For more information, see the BOSC 2009 web site at http://www.open-bio.org/wiki/BOSC_2009.
Abstract acceptances went out today--stay tuned for the schedule, which will be posted once the speakers have confirmed their ...
Posted in BOSC/ISMB, Community, General | No Comments »
Wednesday, May 6th, 2009
As announced here, any last minute requests to postpone dropping support for Python 2.3 from the next release of Biopython must be posted to the main Biopython mailing list no later than Friday, May 8.
Posted in Biopython, Code, Community, Development, OBF | 2 Comments »
Wednesday, April 29th, 2009
Hi all,
You may have noticed we're trying out using the wiki for Biopython cookbook entries. It's a new idea so at the moment there are only a few 'recipes' on offer. If you have some tricks you find yourself using time and again to solve a problem why not ...
Posted in Biopython, Code, Community, Documentation, HOWTO, OBF, Website | No Comments »
Monday, April 27th, 2009
Congratulations to Nick Matzke and Eric Talevich who have had Biopython projects accepted for this year's Google Summer of Code. Both projects were accepted as part of The National Evolutionary Synthesis Center's (NESCent) involvement as a mentoring organisation with the program.
Nick will spend his summer working on modules that ...
Posted in Biopython, Community, OBF Projects | No Comments »
Monday, April 20th, 2009
We are pleased to announce Biopython release 1.50, featuring some significant additions since Biopython 1.49 was released late last year.
GenomeDiagram by Leighton Pritchard has been integrated into Biopython as the Bio.Graphics.GenomeDiagram module.
A new module Bio.Motif has been added, which is intended to replace the existing Bio.AlignAce and Bio.MEME modules. Also ...
Posted in Biopython, Community, Development, OBF, OBF Projects | 2 Comments »
Friday, April 3rd, 2009
We are pleased to announce a beta release of Biopython 1.50 for public testing. There have been some significant changes since Biopython 1.49 was released late last year.
GenomeDiagram by Leighton Pritchard has been integrated into Biopython as the Bio.Graphics.GenomeDiagram module.
A new module Bio.Motif has been added, which is intended to ...
Posted in Biopython, Community, Development, OBF Projects | No Comments »
Friday, March 27th, 2009
Just to let you all know, Biopython is now on twitter. And in case you missed the OBF announcement last month, so is the O|B|F News feed (and BioPerl). You are welcome to follow us (all) on twitter.
I'd also like to remind people there are news feeds ...
Posted in Biopython, Blogroll, Community, General, OBF, Website | No Comments »