Category Archives: OBDA / BioSQL

Server downtime announcement

Continue reading

Posted in BioDAS, BioJava, BioMOBY, BioPerl, Biopython, General, OBDA / BioSQL | Comments Off

The Open Biological Database Access (OBDA) introduction for BioPerl

Continue reading

Posted in BioJava, BioPerl, Biopython, OBDA / BioSQL | Leave a comment

BioSQL and Bioperl-db inching towards release

I got the Oracle version of the biosql schema fully migrated, at least as far as I can tell from here. I’m going to commit the new version some time today. There will also be a sql*plus migration script from pre-Singapore to the current version that supposedly keeps your data intact (be sure to read the disclaimer though).
Continue reading

Posted in OBDA / BioSQL | Comments Off

PostgreSQL issues with bioperl-db

Continue reading

Posted in BioPerl, OBDA / BioSQL | Comments Off