Archive for the ‘OBF’ Category
Sunday, June 21st, 2009
Constructing complicated NCBI Entrez searches can be tricky, but it turns out one of the Entrez Programming Utilities called Entrez EInfo can help.
For example, suppose you want to search for mitochondrial genomes from a given taxa - either just in the Entrez web interface, for use in a script with ...
Posted in Biopython, Blogroll, Code, Development, Documentation, HOWTO, OBF | No Comments »
Monday, June 1st, 2009
The BOSC 2009 schedule of speakers with links to abstracts has been posted at http://www.open-bio.org/wiki/BOSC_2009_Schedule.
Posted in BOSC/ISMB, Community, OBF | No Comments »
Sunday, May 17th, 2009
BOSC Update: Ruttenberg, Hanmer confirmed as Keynotes, Early Registration Deadline Friday: Alan Ruttenberg of Sc.. http://tinyurl.com/p3wy9a #
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Sunday, May 10th, 2009
Dropping Python 2.3 Support: As announced here, any last minute requests to postpone dropping support for Python.. http://tinyurl.com/daypom #
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Wednesday, May 6th, 2009
As announced here, any last minute requests to postpone dropping support for Python 2.3 from the next release of Biopython must be posted to the main Biopython mailing list no later than Friday, May 8.
Posted in Biopython, Code, Community, Development, OBF | 1 Comment »
Sunday, May 3rd, 2009
Biopython projects chosen for Google Summer of Code: Congratulations to Nick Matzke and Eric Talevich who have h.. http://tinyurl.com/cx9f34 #
Introducing (and expanding) the Biopython Cookbook: Hi all,
You may have noticed we’re trying out using th.. http://tinyurl.com/c7ef6h #
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Wednesday, April 29th, 2009
Hi all,
You may have noticed we're trying out using the wiki for Biopython cookbook entries. It's a new idea so at the moment there are only a few 'recipes' on offer. If you have some tricks you find yourself using time and again to solve a problem why not ...
Posted in Biopython, Code, Community, Documentation, HOWTO, OBF, Website | No Comments »
Sunday, April 26th, 2009
Twitter Weekly Updates for 2009-04-19:
Twitter Weekly Updates for 2009-04-12:
Twitter tools installed on OBF we.. http://tinyurl.com/cr4aau #
Biopython release 1.50: We are pleased to announce Biopython release 1.50, featuring some significant additions .. http://tinyurl.com/d6ehqh #
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Monday, April 20th, 2009
We are pleased to announce Biopython release 1.50, featuring some significant additions since Biopython 1.49 was released late last year.
GenomeDiagram by Leighton Pritchard has been integrated into Biopython as the Bio.Graphics.GenomeDiagram module.
A new module Bio.Motif has been added, which is intended to replace the existing Bio.AlignAce and Bio.MEME modules. Also ...
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Sunday, April 19th, 2009
Twitter Weekly Updates for 2009-04-12:
Twitter tools installed on OBF website. Updated WP as well. /jason #
Rem.. http://tinyurl.com/ca7ld6 #
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