Tag Archives: Development

Biopython 1.59 released

Posted on February 24, 2012 by Peter

Source distributions and Windows installers for Biopython 1.59 are now available from the downloads page on the Biopython website and from the Python Package Index (PyPI). Continue reading →

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BioRuby 1.4.2 released

Posted on August 26, 2011 by Naohisa Goto

We are pleased to announce the release of BioRuby 1.4.2. This new release fixes bugs existed in 1.4.1 and adds new features and improvement of performance. Here is a brief summary of changes.

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Biopython 1.58 released

Posted on August 18, 2011 by Peter

Source distributions and Windows installers for Biopython 1.58 are available from the downloads page on the Biopython website and from the Python Package Index (PyPI). A new interface and parsers for the PAML (Phylogenetic Analysis by Maximum Likelihood) package of … Continue reading →

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Biopython 1.57 released

Posted on April 2, 2011 by Brad Chapman

The Biopython community is pleased to announce the release of Biopython 1.57. Source distributions and Windows installers are available from the downloads page on the Biopython website and from the Python Package Index. Bio.SeqIO now includes an index_db() function which … Continue reading →

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Biopython 1.56 released

Posted on November 26, 2010 by Peter

The Biopython team is pleased to release Biopython 1.56, almost exactly three months after our last stable release (Biopython 1.55). The Bio.SeqIO module has been updated to support protein EMBL files (used for the patents database), IMGT files (a variant … Continue reading →

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Biopython dropping Python 2.4 Support?

Posted on November 18, 2010 by Peter

The forthcoming Biopython 1.56 release is planned to be our last release to support Python 2.4. If you would be negatively affected us dropping support for Python 2.4, please let us know as soon as possible. Continue reading →

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Reminder: Abstracts for BOSC 2009 Due April 13

Posted on April 10, 2009 by Kam Dahlquist

This is a reminder from the BOSC 2009 Organizing committee that abstracts for BOSC are due on Monday, April 13.

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Biopython and version control systems

Posted on March 17, 2009 by Peter

Initially for evaluation purposes only, Giovanni and Bartek have setup a mirror of Biopython on GitHub, which is automatically updated from the OBF hosted Biopython CVS repository. See our git migration wiki page for details. If this is favorably received, … Continue reading →

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BioPerl 1.6 RC4

Posted on January 23, 2009 by Jason Stajich

RC4 is up, we are days away from final release…

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BioPerl branched for 1.6, RC1 is up

Posted on December 26, 2008 by Jason Stajich

BioPerl has branched for 1.6 and the RC1 is up for testing as Chris announced.

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