Tag Archives: Development

Biopython 1.69 released

Dear Biopythoneers, Source distributions and Windows installers for Biopython 1.69 are now available from the downloads page on the official Biopython website, and the release is also on the Python Package Index (PyPI).

Posted in Biopython, Code, Development, OBF, OBF Projects, Uncategorized | Tagged , , , , , , | 1 Comment

OBF Travel Fellowship – CWL week in London

This is a guest blog post from Anton Khodak, who was supported by the ongoing Open Bioinformatics Foundation travel fellowship program to attend a week long Common Workflow Language (CWL) workshop in London, November 2016. This was a natural continuation … Continue reading

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New BioJava Logo Design Competition

BioJava is organizing a design competition to come up with a new logo. Anybody can participate: The logo should look modern and be better than the current one (yellow circle) The logo should be able to be rendered as a … Continue reading

Posted in BioJava, Blogroll, BOSC/ISMB, Community, Development, OBF, OBF Projects, Website | Tagged , , , , , , | 7 Comments

Biopython 1.67 released

This was long over-due, but Biopython 1.67 was released earlier today. The most recent delay was due to migrating our website from MediaWiki to GitHub Pages earlier this year, following an OBF server failure. Source distributions and Windows installers for Biopython 1.66 … Continue reading

Posted in Biopython, Blogroll, Code, Development, OBF, OBF Projects | Tagged , , , , | 39 Comments

Welcome to our Google Summer of Code 2016 students

The Open Bioinformatics Foundation is participating in the Google Summer of Code 2016 program, and last Friday the selected students were announced. Congratulations to all of you, and welcome. I also want to use this opportunity to thank all students who applied. Resources … Continue reading

Posted in Blogroll, Community, Development, Google Summer of Code, OBF, OBF Projects | Tagged , , | 26 Comments

BOSC CodeFest 2016

The Bioinformatics Open Source Conference (BOSC) is a two day meeting focused on open source bioinformatics. We aim to encourage and support a friendly, open and productive community that helps us work together to answer hard biological questions. We’ll get … Continue reading

Posted in Blogroll, BOSC/ISMB, Community, Development, General, OBF, OBF Projects, Website | Tagged , , , , , | 24 Comments

Biopython 1.66 released

Source distributions and Windows installers for Biopython 1.66 are now available from the downloads page on the official Biopython website and from the Python Package Index (PyPI). This release of Biopython supports Python 2.6, 2.7, 3.3, 3.4 and 3.5, although support for Python … Continue reading

Posted in Biopython, Blogroll, Code, Community, Development, OBF, OBF Projects | Tagged , , , , , | 25 Comments

GSoC project Sambamba published in scientific journal

(This is a repost of a BLOG on Google Open Source news about Google’s open source student programs and software releases) One of our goals with GSoC is to inspire young developers to participate in open source development, hopefully continuing … Continue reading

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Sadly OBF not accepted for GSoC 2015

Last year’s Google Summer of Code 2014 was very productive for the OBF with six students working on Bio* and related bioinformatics projects. We applied to be part of GSoC 2015, but unfortunately this year were not accepted. Continue reading

Posted in BioJava, BioLib, BioPerl, Biopython, BioRuby, Blogroll, Community, Development, General, Google Summer of Code, OBF, OBF Projects | Tagged , , , , | 7 Comments

OBF Google Summer of Code 2014 Wrap-up

In 2014, OBF had six students in the Google Summer of Code 2014™ (GSoC) program mentored under its umbrella of Bio* and related open-source bioinformatics community projects: Loris Cro (Bioruby) with mentors Francesco Strozzi and Raoul Bonnal; Evan Parker (Biopython) … Continue reading

Posted in Biopython, BioRuby, Community, Google Summer of Code, OBF | Tagged , , , , | 8 Comments