Tag Archives: open-source

Biopython 1.72 released

Dear Biopythoneers, I’m writing this in Portland at the GCC BOSC 2018 conference, where I will present the Biopython Project Update 2018 talk tomorrow. Yesterday during my airport layover in Iceland, I published the Biopython 1.72 release to our website … Continue reading

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BioJava 5.0.0 is out

BioJava 5.0.0 was released on the 23rd of March 2018. This represents a major milestone that brings more consolidation and reorganisation of modules. This is the first release to be based on Java 8, bring in your lambdas and stream … Continue reading

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Biopython 1.71 released

Dear Biopythoneers, Source distributions of Biopython 1.71 are now available from the downloads page on the official Biopython website, and the release is also on the Python Package Index (PyPI) including pre-compiled Wheel Packages for Linux, Mac OS X and Windows. This … Continue reading

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BOSC 2017 report

BOSC 2017 (https://www.open-bio.org/wiki/BOSC_2017) was held in Prague in July 2017 as part of the annual ISMB conference. Nearly 250 people, half of whom were first-time attendees, participated in the meeting. Over 50 talks and a similar number of posters covered … Continue reading

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Biopython on Podcast.__init__

Podcast.__init__ describes itself as “The Podcast About Python and the People Who Make It Great”, and the most recent episode is “Biopython with Peter Cock, Wibowo Arindrarto, and Tiago Antão (Episode 125)“. Listening to the finished podcast, interviewer Tobias Macey … Continue reading

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Biopython 1.70 released

Dear Biopythoneers, Source distributions of Biopython 1.70 are now available from the downloads page on the official Biopython website, and the release is also on the Python Package Index (PyPI). Windows installers and/or wheels should be available later. (Update: Compiled wheel packages … Continue reading

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Biopython 1.69 released

Dear Biopythoneers, Source distributions and Windows installers for Biopython 1.69 are now available from the downloads page on the official Biopython website, and the release is also on the Python Package Index (PyPI).

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Biopython 1.67 released

This was long over-due, but Biopython 1.67 was released earlier today. The most recent delay was due to migrating our website from MediaWiki to GitHub Pages earlier this year, following an OBF server failure. Source distributions and Windows installers for Biopython 1.67 … Continue reading

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Biopython 1.65 released

Source distributions and Windows installers for Biopython 1.65 are now available. The most visible change is that the Biopython sequence objects now use string comparison, rather than Python’s object comparison. Continue reading

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Biopython 1.64 released

Source distributions and Windows installers for Biopython 1.64 are now available from the downloads page on the official Biopython website and from the Python Package Index (PyPI). This release of Biopython supports Python 2.6 and 2.7, 3.3 and also the new 3.4 version. It is also tested on PyPy 2.0 … Continue reading

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